Insertion junction: LMJ.RY0402.237696_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.237696
Chromosome:chromosome 13
Location:2008963
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre13.g576740 (1 of 70) PF07282 - Putative transposase DNA-binding domain (OrfB_Zn_ribbon) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCATTAACCGTGCTAGCGTCCTATGGCAT
Internal bar code:CTGCATGGGGCCCAAAAGTTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:733
LEAP-Seq percent confirming:99.7182
LEAP-Seq n confirming:5308
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGCTGAACAATAGCGACA
Suggested primer 2:GTAGTCGGGTAGCCAGCAAG