Insertion junction: LMJ.RY0402.237711_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.237711
Chromosome:chromosome 5
Location:2203170
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre05.g234653 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTGGTCATCTGGGAAGAGCTCCTCGTCG
Internal bar code:TCCTTGGGCAGGAAAAGATGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:422
LEAP-Seq percent confirming:88.9926
LEAP-Seq n confirming:44337
LEAP-Seq n nonconfirming:5484
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTGTGTGTGTGTGTGTGT
Suggested primer 2:GACGTGGGACGTTACAGGAT