Insertion junction: LMJ.RY0402.237725_3

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.237725
Chromosome:chromosome 12
Location:2403108
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g507200 (1 of 2) IPR000104//IPR003613 - Antifreeze protein, type I // U box domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGCGCCCCATCACCCCGACCAACAGTTC
Internal bar code:ATAGCCAAAATTCATTCGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:172
LEAP-Seq percent confirming:99.1879
LEAP-Seq n confirming:5618
LEAP-Seq n nonconfirming:46
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTGTGGTCTGTGTGTGG
Suggested primer 2:ATAACCCAACAAAACGCTGC