Insertion junction: LMJ.RY0402.237757_3

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.237757
Chromosome:chromosome 17
Location:1331877
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g706000 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCCTGGAGCGCTAGCTGCTGCCGCGGTG
Internal bar code:TGCGCGTTTGCCAACGGTTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1027
LEAP-Seq percent confirming:99.2379
LEAP-Seq n confirming:19792
LEAP-Seq n nonconfirming:152
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:AGAGCATTGAGGCGAGATGT
Suggested primer 2:GTTGATTGACGGTGTGTTGC