Insertion junction: LMJ.RY0402.237764_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.237764
Chromosome:chromosome 3
Location:3756335
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g169900 (1 of 4) IPR023222 - PsbQ-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCTCTCTTACCCGGACCAGTGTTGCCCC
Internal bar code:AATGGCTAGGTTATTAGATTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:619
LEAP-Seq percent confirming:99.3202
LEAP-Seq n confirming:1461
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:TTCGGAGGTAGGTCATGGAG
Suggested primer 2:ATGAGGAGAAATAGGGGCGT