Insertion junction: LMJ.RY0402.237814_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.237814
Chromosome:chromosome 13
Location:4488586
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre13.g602300 TMC4 (1 of 1) 2.1.1.202 - Multisite-specific tRNA:(cytosine-C(5))-methyltransferase; putative tRNA (cytosine-5)-methyltransferase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGACCGCGGCGGCTGGGGCCCCATCTAC
Internal bar code:GACAGACCATGTGAACAGCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:379
LEAP-Seq percent confirming:59.5
LEAP-Seq n confirming:119
LEAP-Seq n nonconfirming:81
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:AGAAGGGTGCACTATGTGGG
Suggested primer 2:CTGTTGTCACACAACCTGGG