Insertion junction: LMJ.RY0402.237836_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.237836
Chromosome:chromosome 5
Location:2707182
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre05.g236700 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCCAGTACGGGGCTGTGCCGTACGCACA
Internal bar code:TGCGGTTACCGGTTGAAGGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:595
LEAP-Seq percent confirming:97.6636
LEAP-Seq n confirming:1045
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCCCATGCTTTTGAATGT
Suggested primer 2:ACGTCCAACCGACAGATTTC