Insertion junction: LMJ.RY0402.237836_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.237836
Chromosome:chromosome 5
Location:2707190
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre05.g236700 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGATCAATATCGGCTTATCAGCTGCCGGGG
Internal bar code:GCCTGATCTAGGTTGGGTGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:693
LEAP-Seq percent confirming:99.5455
LEAP-Seq n confirming:5914
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCCCATGCTTTTGAATGT
Suggested primer 2:ACGTCCAACCGACAGATTTC