Insertion junction: LMJ.RY0402.237875_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.237875
Chromosome:chromosome_5
Location:878171
Confidence (%):95
Locus systematic id Locus common name Defline Orientation Feature
Cre05.g247600 UBC2 Ubiquitin-conjugating enzyme E2 antisense 5'UTR

Insertion site details

Flanking sequence (orientation from cassette outwards):CGAGTAACGTCGAAACAAAGCTAGCTGCGA
Internal bar code:CTGGATCGAGCGTGGGCCCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:268
LEAP-Seq percent confirming:17.9
LEAP-Seq n confirming:179
LEAP-Seq n nonconfirming:821
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCTCTAATGCTTCACACA
Suggested primer 2:AAAATGGAGGATTTTTGGGG