Insertion junction: LMJ.RY0402.237883_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.237883
Chromosome:chromosome 7
Location:4038697
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre07.g340200 TEF3,PGRL1 Proton-gradient related-like; (1 of 1) PTHR31032//PTHR31032:SF1 - FAMILY NOT NAMED // PGR5-LIKE PROTEIN 1A, CHLOROPLASTIC-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTGGCGCCCGACTACGGTGTTTTATTGC
Internal bar code:CGAGTGGACGGCACCAGCAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:625
LEAP-Seq percent confirming:98.9932
LEAP-Seq n confirming:5211
LEAP-Seq n nonconfirming:53
LEAP-Seq n unique pos:93

Suggested primers for confirmation by PCR

Suggested primer 1:AGGCGGACATGATCTTTGAC
Suggested primer 2:CGGGAACTAATTGTGGCAGT