Insertion junction: LMJ.RY0402.237900_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.237900
Chromosome:chromosome 16
Location:1023285
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre16.g649150 (1 of 1) PF13414//PF13920 - TPR repeat (TPR_11) // Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_3) 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGCTGTGCCATTGTGCGCAATTGCTGGT
Internal bar code:TAAGTGACCTATGGTATTCGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:419
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCTTGCTAAGGGTAACAC
Suggested primer 2:CAAGGATGGTGGTGTGACTG