Insertion junction: LMJ.RY0402.237901_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.237901
Chromosome:chromosome 3
Location:7688888
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g203730 DEGO1,DEG12 Inactive Deg protease; (1 of 4) PTHR22939//PTHR22939:SF83 - SERINE PROTEASE FAMILY S1C HTRA-RELATED // PROTEASE DO-LIKE 2, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATCTCCTGAAAGTTAGCAGCCCCGTTTGC
Internal bar code:CGGCAAATACGGGGCACGGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:282
LEAP-Seq percent confirming:97.0359
LEAP-Seq n confirming:1866
LEAP-Seq n nonconfirming:57
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCCCTTGTGCTCGCTAAC
Suggested primer 2:ATTTCAAAGTTACGCACCCG