Insertion junction: LMJ.RY0402.237905_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.237905
Chromosome:chromosome 3
Location:1752583
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g153850 (1 of 10) PTHR31867:SF1 - EXPANSIN-A1-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCCAGTCCCTTCTGGTGCAGTTTTACCG
Internal bar code:GTACGTGACAGTTAAAACGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:750
LEAP-Seq percent confirming:99.0128
LEAP-Seq n confirming:1003
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TGAAACATGCTTCGCTTACG
Suggested primer 2:TGGGTTCTCATCTCTCGCTT