Insertion junction: LMJ.RY0402.237911_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.237911
Chromosome:chromosome 12
Location:3934443
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g516300 CGL154 Conserved in the Green Lineage; (1 of 11) PF13229 - Right handed beta helix region (Beta_helix) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTAGCCGGCCGGCGCGAAGTGGGTTGCG
Internal bar code:AGGGGGTGGGCCCCGAAATACG

Confirmation - LEAP-Seq

LEAP-Seq distance:749
LEAP-Seq percent confirming:99.1197
LEAP-Seq n confirming:563
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TACGCAAACCCATAATGCAA
Suggested primer 2:AATTACTGGCTGAACGTGCC