Insertion junction: LMJ.RY0402.238006_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.238006
Chromosome:chromosome 5
Location:3138859
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre05.g239300 (1 of 85) IPR009057 - Homeodomain-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCATGGGCAATCGAAGCCGCAGCACCGCT
Internal bar code:TCCAGACGTGGGGCACTTGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:594
LEAP-Seq percent confirming:99.2248
LEAP-Seq n confirming:768
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TAATCCGTTCGACTTGGGAG
Suggested primer 2:TTTACTTGGACTGCCTCGCT