Insertion junction: LMJ.RY0402.238006_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.238006
Chromosome:chromosome 15
Location:663578
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre15.g637750 (1 of 7) IPR000104//IPR020683 - Antifreeze protein, type I // Ankyrin repeat-containing domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCAGCGCACCGCCAAACCCGAATACACAT
Internal bar code:CCAGCAAGTCTTAACTCCGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:562
LEAP-Seq percent confirming:73.8594
LEAP-Seq n confirming:599
LEAP-Seq n nonconfirming:212
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CCATGGGATGGTGTGTATCA
Suggested primer 2:GCGTCGCCAAGTAGTAGTGG