Insertion junction: LMJ.RY0402.238337_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.238337
Chromosome:chromosome 9
Location:4685129
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g396883 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGTTGCTCAAGCATCACTGCTGTCAAGG
Internal bar code:CAGAGGCGGTAGTTGCACCTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:576
LEAP-Seq percent confirming:97.561
LEAP-Seq n confirming:320
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GCATTCGCATTCACTAGCAA
Suggested primer 2:GTATGTTGTAGGGCGGTGCT