Insertion junction: LMJ.RY0402.238350_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.238350
Chromosome:chromosome 12
Location:1345671
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g488600 (1 of 1) IPR000104//IPR006059 - Antifreeze protein, type I // Solute-binding family 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCAAGTATGCGCAAGGCAAGGAAAGAGCA
Internal bar code:GGGTTTCGCCTCGGAGGGGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:530
LEAP-Seq percent confirming:64.0671
LEAP-Seq n confirming:879
LEAP-Seq n nonconfirming:493
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCGGTGTGATAAACGATG
Suggested primer 2:TCCTATGTGTGCGTGTCCAT