Insertion junction: LMJ.RY0402.238366_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.238366
Chromosome:chromosome 10
Location:1512235
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre10.g428900 RRM9,CGL72 (1 of 1) 2.1.1.226 - 23S rRNA (cytidine(1920)-2'-O)-methyltransferase; Conserved in the Green Lineage 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGATTGCGCTTGTTTGAATACGAGCTGTG
Internal bar code:TACGCCCGCGTCGAGCAGCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:145
LEAP-Seq percent confirming:75.6757
LEAP-Seq n confirming:168
LEAP-Seq n nonconfirming:54
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCTTCTCCATCTTGAGTC
Suggested primer 2:CATGTGGCTGCACTGACTCT