Insertion junction: LMJ.RY0402.238370_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.238370
Chromosome:chromosome 12
Location:7308884
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g557500 (1 of 1) IPR000104//IPR002073//IPR003607//IPR006189//IPR023088 - Antifreeze protein, type I // 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain // HD/PDEase domain // CHASE domain // 3'5'-cyclic nucleotide phosphodiesterase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATTGGGTCCTTGTTGAAACATCTGGCTGG
Internal bar code:TGCACGTTGCGGAGGAACGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:495
LEAP-Seq percent confirming:80.2446
LEAP-Seq n confirming:853
LEAP-Seq n nonconfirming:210
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TACCGGTACAGCATCACCAA
Suggested primer 2:GCGCATAAGTGTGCTTGTGT