Insertion junction: LMJ.RY0402.238370_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.238370
Chromosome:chromosome 12
Location:7308942
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g557500 (1 of 1) IPR000104//IPR002073//IPR003607//IPR006189//IPR023088 - Antifreeze protein, type I // 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain // HD/PDEase domain // CHASE domain // 3'5'-cyclic nucleotide phosphodiesterase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATAATACCCCGGAACCCGGTAGTACCCCA
Internal bar code:CCGGGACAGAAGTCAACGGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:438
LEAP-Seq percent confirming:81.1538
LEAP-Seq n confirming:211
LEAP-Seq n nonconfirming:49
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCATAAGTGTGCTTGTGT
Suggested primer 2:AATGCATGCGACATTTGTGT