Insertion junction: LMJ.RY0402.238431_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.238431
Chromosome:chromosome 13
Location:922722
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre13.g567950 STA1,AGP1 ADP-glucose pyrophosphorylase large subunit; (1 of 1) PTHR22572:SF119 - GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE LARGE SUBUNIT 1, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAGACTCCTGCCCGGGTTACGAACGGGT
Internal bar code:TAACGGAATTCGAGGAGCTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:552
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:396
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTCAAGAAGTCGGTGCTG
Suggested primer 2:TGTCTGCAGGCGACATTTAG