Insertion junction: LMJ.RY0402.238488_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.238488
Chromosome:chromosome 16
Location:557943
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g692500 (1 of 19) PTHR31251:SF1 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 10-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGCCTTGTTGGCGGCCTGAACGGCGGCC
Internal bar code:AGGGTACGTGCTGTTTCGGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:457
LEAP-Seq percent confirming:98.3933
LEAP-Seq n confirming:1531
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:ATTCTAATGGTGGTGCTGCC
Suggested primer 2:GACACGAAGCTGTCTCCTCC