Insertion junction: LMJ.RY0402.238589_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.238589
Chromosome:chromosome 9
Location:6808964
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g409700 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGCGATCAAGTGAGTGCAAGAGGCCTGA
Internal bar code:GGGGGTCGAAAGGCCTAGATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:565
LEAP-Seq percent confirming:90.0697
LEAP-Seq n confirming:517
LEAP-Seq n nonconfirming:57
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TAGCTGAGTGCAGTGCTCGT
Suggested primer 2:CCACCACATAAGGCACACAC