Insertion junction: LMJ.RY0402.238633_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.238633
Chromosome:chromosome 12
Location:3325735
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g497700 SNE8 (1 of 8) PTHR10366:SF411 - HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173 PROTEIN; Cinnamoyl-CoA reductase/flavanone 4-reductase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTTCCCAAAGCCGCCGCTCACACCCTACT
Internal bar code:GTCAGATTAGCGTAGGCCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:553
LEAP-Seq percent confirming:96.9072
LEAP-Seq n confirming:94
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CTCACCACCACTTTCCAGGT
Suggested primer 2:CACTTGCGGCTATTCTGTCA