Insertion junction: LMJ.RY0402.239025_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.239025
Chromosome:chromosome 3
Location:2720568
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g161550 FAP55 (1 of 1) IPR009053//IPR023220 - Prefoldin // Type IV secretion system, VirB5-domain; Flagellar Associated Protein 55 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGGTTGCGAGGTGAGGGATTGGAAGGAGG
Internal bar code:CCGTAACGTCAACTGTGGAAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:188
LEAP-Seq percent confirming:83.0769
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:TGTATTGCAGCTTCTGCGTC
Suggested primer 2:TCAGCACGCGCTAATAAATG