Insertion junction: LMJ.RY0402.239193_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.239193
Chromosome:chromosome 2
Location:4792082
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre02.g102776 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTTGCGTGCCTTCCTACCTAATTCATGAT
Internal bar code:CCCCGCCCACTCGGTTCCATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:431
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:90
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GATGCAGCCAGAGTGTTTCA
Suggested primer 2:CCGAACAGGCAGGTTTGTAT