Insertion junction: LMJ.RY0402.239229_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.239229
Chromosome:chromosome 3
Location:5624463
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g187100 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGCCAGTGCCTACCACTTTCACTGCCTA
Internal bar code:CAAAACGGTCTTGCCTTGCCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:321
LEAP-Seq percent confirming:85.5932
LEAP-Seq n confirming:202
LEAP-Seq n nonconfirming:34
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TCAATGCGGTGATGTGTTTT
Suggested primer 2:ACCCGGCTTTCTTTCTTCAT