Insertion junction: LMJ.RY0402.239245_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.239245
Chromosome:chromosome 8
Location:701895
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre08.g360300 SDR11 Short-chain dehydrogenase/reductase; (1 of 1) 1.1.1.300//1.1.1.330 - NADP-retinol dehydrogenase / Retinol dehydrogenase (NADP(+)) // Very-long-chain 3-oxoacyl-CoA reductase / Very-long-chain beta-ketoacyl-CoA reductase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGGCATGTAACATTCTTGCGCAACTATC
Internal bar code:GCACCTGGGAGGTATTGATGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:424
LEAP-Seq percent confirming:99.0615
LEAP-Seq n confirming:2850
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CTAGCTGTATGGGCTGGCTC
Suggested primer 2:TACATGATGGCGTTGGAAAA