Insertion junction: LMJ.RY0402.239245_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.239245
Chromosome:chromosome 8
Location:701898
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre08.g360300 SDR11 Short-chain dehydrogenase/reductase; (1 of 1) 1.1.1.300//1.1.1.330 - NADP-retinol dehydrogenase / Retinol dehydrogenase (NADP(+)) // Very-long-chain 3-oxoacyl-CoA reductase / Very-long-chain beta-ketoacyl-CoA reductase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGCATAGCCGCTTTCCCCCGAGGGCGCG
Internal bar code:GCGAGTGGCCTAGGCCATAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:429
LEAP-Seq percent confirming:98.4733
LEAP-Seq n confirming:129
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CTAGCTGTATGGGCTGGCTC
Suggested primer 2:TACATGATGGCGTTGGAAAA