Insertion junction: LMJ.RY0402.239281_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.239281
Chromosome:chromosome 5
Location:3037961
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre05.g238650 PHC5 (1 of 24) IPR003882//IPR024616 - Pistil-specific extensin-like protein // Pherophorin; Pherophorin-chlamydomonas homolog 5 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGGGCGGTGGCCGCGGCCCTGGAAGTGG
Internal bar code:AAGTTCAGGATTTAATAGGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:603
LEAP-Seq percent confirming:98.6607
LEAP-Seq n confirming:221
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTTGTAGGCATCACCGAA
Suggested primer 2:GCCAGGAGAGCTTAATGTGC