Insertion junction: LMJ.RY0402.239309_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.239309
Chromosome:chromosome 3
Location:7649958
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g204100 ELG5 Exostosin-like glycosyltransferase 5; (1 of 34) 2.4.2.41 - Xylogalacturonan beta-1,3-xylosyltransferase / Xylogalacturonan xylosyltransferase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGAGGGTTGTGCAAGTGTCGTGTCAATAC
Internal bar code:GACGGGCCCGTTGCTTGTCCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:501
LEAP-Seq percent confirming:99.0991
LEAP-Seq n confirming:220
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CTGATACGGCAGTACGCAGA
Suggested primer 2:TATGCGTCCAGAGTGCTGAC