Insertion junction: LMJ.RY0402.239527_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.239527
Chromosome:chromosome 17
Location:3818977
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g727850 (1 of 781) IPR000104 - Antifreeze protein, type I 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGACCGCACGAAGGCTTTCAACCCTCACC
Internal bar code:GTTCAGGGCCTGGTTCATCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:381
LEAP-Seq percent confirming:87.3684
LEAP-Seq n confirming:166
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGCAGTATGCAATTTCGC
Suggested primer 2:GTGTTTTGCTTCGCGTTTCT