Insertion junction: LMJ.RY0402.239645_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.239645
Chromosome:chromosome 7
Location:2817351
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre07.g331800 CPK1,CGL79 conserved protein with carbohydrate kinase motif; (1 of 1) PTHR10584//PTHR10584:SF153 - SUGAR KINASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCATCCCCACTCCCTCCCCAGTCCCCAGT
Internal bar code:TAGCGCCGGCGGTGTTAGCAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:201
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CAAATCTGACTGCCTGCAAA
Suggested primer 2:ATGGGTTTTGTCGTCTCAGC