Insertion junction: LMJ.RY0402.239905_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.239905
Chromosome:chromosome 5
Location:249673
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre05.g233650 FXL9 (1 of 2) IPR000014//IPR011990 - PAS domain // Tetratricopeptide-like helical domain; FixL-like PAS domain protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCTCTCATCAACGGCGAGGCCGCGGCAGA
Internal bar code:ACTCGCAATCCCCCTCGGGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:227
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CTGACATAGGCATGACACGG
Suggested primer 2:GAGCTTCGAGTCCTTCATGG