Insertion junction: LMJ.RY0402.239952_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.239952
Chromosome:chromosome 9
Location:6464099
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g407200 POD1 Putative all-trans-retinol 13%252C14-reductase; (1 of 3) 5.2.1.13 - Prolycopene isomerase / CRTISO intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGACAGTGCGAGCGAGGCGCAAAGAGTGG
Internal bar code:TTGGGCCGGCATATCGATCTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:441
LEAP-Seq percent confirming:97.2873
LEAP-Seq n confirming:789
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGCCCAAACTAAACCAAA
Suggested primer 2:CCCAAGTGGGAGTGGAAGTA