Insertion junction: LMJ.RY0402.240008_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.240008
Chromosome:chromosome 9
Location:2776989
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g389050 CNX5,MAW4 (1 of 2) PTHR16861//PTHR16861:SF4 - GLYCOPROTEIN 38 // PODOPLANIN; Membrane-associated hydroxyproline-rich glycoprotein 4 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGTTGTGCCTTCCTCCGTTATTGCTGCC
Internal bar code:GATCCGTGGGTCCCGCACATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:287
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TGACCGCTCTTTTCCTCACT
Suggested primer 2:TTATTAGGTATGCCCGCCAG