Insertion junction: LMJ.RY0402.240363_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.240363
Chromosome:chromosome 10
Location:5179517
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre10.g456700 CASC3,EJC1 (1 of 1) PF09405 - CASC3/Barentsz eIF4AIII binding (Btz); Exon Junction Complex component 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATCGTCAGCTACAACGCAAGGTGGGCGGA
Internal bar code:GCACGCTAACTCGGCTAACGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:472
LEAP-Seq percent confirming:97.3684
LEAP-Seq n confirming:555
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CGATGTTTTGTAGGGGCACT
Suggested primer 2:TCAATTGCCAAGCTTCACTG