Insertion junction: LMJ.RY0402.240450_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.240450
Chromosome:chromosome 17
Location:478867
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g699200 (1 of 1) IPR000104//IPR000626//IPR029071 - Antifreeze protein, type I // Ubiquitin domain // Ubiquitin-related domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTCGCTCGTGGGCCTGGAGCAAGCGTGA
Internal bar code:CTAGCTTCGCGTAGAAGGTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:175
LEAP-Seq percent confirming:76.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCTGCTCACAGTTCCACA
Suggested primer 2:GAAGAAGAGAGGACGCGATG