Insertion junction: LMJ.RY0402.240477_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.240477
Chromosome:chromosome 9
Location:2788532
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g389000 (1 of 1) PTHR23012:SF61 - AT07234P-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTTATGCTCGTGCGTGACATCAGAGCAGC
Internal bar code:TCCGGTTACGTAGGTTGGAGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:789
LEAP-Seq percent confirming:99.5385
LEAP-Seq n confirming:647
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CTTTGATGTCGGGTGTTGTG
Suggested primer 2:AGTTTGTCTGGTTCTGCGCT