Insertion junction: LMJ.RY0402.240552_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.240552
Chromosome:chromosome 1
Location:3749197
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g024250 HEL4 DEAH box ATP-dependent RNA helicase; (1 of 1) 1.14.13.101 - Senecionine N-oxygenase / Senecionine monooxygenase (N-oxide-forming) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAATTGAAATCACGGTACCTGACCCCGCGC
Internal bar code:CCGCAGGATTGAGGTGACGAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:508
LEAP-Seq percent confirming:96.3855
LEAP-Seq n confirming:160
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TTGATTTGAAGCTGCTGGTG
Suggested primer 2:GCTGCGTGTGCTAGTGTTGT