Insertion junction: LMJ.RY0402.240660_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.240660
Chromosome:chromosome 5
Location:2555803
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre05.g236050 (1 of 2) IPR015097 - Lung surfactant protein D coiled-coil trimerisation 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTAACTCAGTTCAACACTCTGTGTGTGAC
Internal bar code:AATTTCCGACGGTTCTATGCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:200
LEAP-Seq percent confirming:99.5331
LEAP-Seq n confirming:6396
LEAP-Seq n nonconfirming:30
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCGTACCTGACACAGACT
Suggested primer 2:CATGCTAGCTAGGACGGAGG