Insertion junction: LMJ.RY0402.240675_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.240675
Chromosome:chromosome 16
Location:181591
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g695050 ECH3,HCD1 (1 of 1) 1.1.1.35//4.2.1.17//5.1.2.3//5.3.3.8 - 3-hydroxyacyl-CoA dehydrogenase / Beta-keto-reductase // Enoyl-CoA hydratase / Unsaturated acyl-CoA hydratase // 3-hydroxybutyryl-CoA epimerase // Dodecenoyl-CoA isomerase / Dodecenoyl-CoA Delta-isomerase; Enoyl-CoA hydratase 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTTTGGACAAGTGATGTCTTATTGACAT
Internal bar code:ACGACCCATCATACGCGGATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:474
LEAP-Seq percent confirming:99.619
LEAP-Seq n confirming:523
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGAGCAGGAAAGGAGTTG
Suggested primer 2:GGACAGTGTTGAGGCAGGTT