Insertion junction: LMJ.RY0402.240761_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.240761
Chromosome:chromosome 13
Location:2806037
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre13.g583050 Tic55-like5,TIC55-5,PAO8 Pheophorbide a oxygenase-related protein; (1 of 3) K13071 - pheophorbide a oxygenase (PAO, ACD1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCGCCGTTGTTCGGCTGTGTGGTGGACT
Internal bar code:GTGAAGGTGTAATGGAAAGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:77
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGGAGAAACATGTGAGCA
Suggested primer 2:CAGTATTCAGCTCGGTGCAA