Insertion junction: LMJ.RY0402.240872_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.240872
Chromosome:chromosome 9
Location:3482991
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g389578 PSBP5 PsbP-like protein of thylakoid lumen; (1 of 1) PTHR31407//PTHR31407:SF16 - FAMILY NOT NAMED // PSBP DOMAIN-CONTAINING PROTEIN 7, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGCATGCAGGGCCCCGGCTTCCAAACGC
Internal bar code:CGCAGTTGACGCTCGCACGCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:576
LEAP-Seq percent confirming:99.3182
LEAP-Seq n confirming:1311
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:ATACCGTGTCAGGCAGAACC
Suggested primer 2:CGTATGTGGAGGTGTCATGC