Insertion junction: LMJ.RY0402.241023_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.241023
Chromosome:chromosome 7
Location:3312580
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre07.g334600 CGL20 (1 of 1) PTHR35713//PTHR35713:SF1 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MOB24; Conserved in the Green Lineage 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAACAATCTAATCACGGGAAACCCTCAGGC
Internal bar code:TAGAGGACCGCCCGGCCTGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:931
LEAP-Seq percent confirming:99.3003
LEAP-Seq n confirming:1703
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GACATCTTCCCGGAGTTTGA
Suggested primer 2:TGCTGCAAACCTTCATTCTG