Insertion junction: LMJ.RY0402.241223_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.241223
Chromosome:chromosome 9
Location:6362981
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre09.g406950 (1 of 5) IPR000104//IPR016024 - Antifreeze protein, type I // Armadillo-type fold CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACGTTGACGCCGGTGGCGGCCTGGAAGT
Internal bar code:TACTATCGGGCAGAACCGATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:42
LEAP-Seq percent confirming:48.5714
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCTCTGCAACTCGTGTCC
Suggested primer 2:GTATTTTCAGTTTGGCGGGA