Insertion junction: LMJ.RY0402.241258_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.241258
Chromosome:chromosome 6
Location:5242331
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre06.g282251 (1 of 12) IPR000104//IPR002893 - Antifreeze protein, type I // Zinc finger, MYND-type 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCAGTGCGTCGTACCGTGTGTTGTCCTC
Internal bar code:TCACACCTGCAACCGCTGGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:578
LEAP-Seq percent confirming:98.125
LEAP-Seq n confirming:1256
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GGGCGCTTTTCCTCTAGACT
Suggested primer 2:GTTAGGGCGAGTCTCAGTCG