Insertion junction: LMJ.RY0402.241423_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.241423
Chromosome:chromosome 2
Location:6052790
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre02.g112600 (1 of 3) PTHR13780//PTHR13780:SF49 - AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGTCAAAATACACATTCACGGCCAACAC
Internal bar code:GGGGACCCAAGGCTGATAGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:182
LEAP-Seq percent confirming:77.5281
LEAP-Seq n confirming:138
LEAP-Seq n nonconfirming:40
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTCAGGTGGTAGCTGTGT
Suggested primer 2:AGGGGGTAGCTGACTCCAAT