Insertion junction: LMJ.RY0402.241519_4

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.241519
Chromosome:chromosome 8
Location:2662667
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre08.g373150 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCTGTGCCCGGCTACCTGTGGCCGTTGA
Internal bar code:CCACAGGGTAGAAGGAAGGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:198
LEAP-Seq percent confirming:96.3563
LEAP-Seq n confirming:238
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:AATGATGTCGCAGCAGTCAC
Suggested primer 2:TGACACACACGACTCAGCAA